May 24, 2019
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PUBLICATIONS ON GENETICS AND BIOTECHNOLOGY

PUBLICATIONS ON GENETICS AND BIOTECHNOLOGY

  1. Shekhar, M.S., Gopikrishna, G. and Azad, I.S. (2005) PCR-RFLP Analysis of 12s and 16s Mitochondrial rRNA genes from brackishwater finfish and shellfish species, Asian Fisheries Science, 18: 39-48.
  2. Gopikrishna, G., Sathianandan, T.V. and Sarada, C. (2006) Truss morphometry in the Asian seabass, Journal of the Marine Biological Association of India, 48(2): 220-223.
  3. Shekhar, M.S., Azad, I.S. and Jithendran, K.P. (2006) RT-PCR and sequence analysis of Macrobrachium rosenbergii nodavirus : Indian isolate. Aquaculture, 252: 128-132.
  4. Azad, I.S., Shekhar, M.S. , Arasu, A.R.T., and Jithendran, K.P. (2006). Natural outbreak of Viral Nerve Necrosis (VNN) in the hatchery produced fry of Asian sea bass (Lates calcarifer Bloch) - a sequential analysis of histopathology by light and electron microscopy. Diseases of Aquatic Organisms, 73, 123-130.
  5. Azad, I.S, Jithendran, K.P, Shekhar, M.S., Arasu, A.R.T., and Pena L.D. (2006). Immunolocalisation of nervous necrosis virus indicates vertical transmission in hatchery produced Asian sea bass (Lates calcarifer Bloch ) – A case study. Aquaculture, 255: 39-47.
  6. Shekhar, M.S. and Ravichandran, P.(2007). Comparison of white spot syndrome virus structural gene sequences from India with those at GenBank Aquaculture Research, 38, 321-324.
  7. Li, Y., Wongprasert, K., Shekhar, M.S., Ryan, J., Dierens, L., Meadows, J., Preston, N., Coman,G., and Lyons, R.E. (2007) Development of two microsatellite multiplex systems for black tiger shrimp Penaeus monodon and its application in genetic diversity study for two populations. Aquaculture, 266, 279-288.
  8. Shekhar, M.S., Gopikrishna, G., Gopal, C., Pillai, S.M. and Ravichandran, P, (2007) Sequence comparison of mitochondrial 16s rRNA gene segment in penaeids, Asian Fisheries Science 20(2): 205-206.
  9. Shekhar, M.S and Lu, Y. (2009). Application of Nucleic-acid-based Therapeutics for Viral Infections in Shrimp Aquaculture. Mar Biotechnol 11:1–9.
  10. Hayes, B. J., Gitterle, T., Gopikrishna, G., Gopal, C, Krishna, G, Jahageerdar, S, Lozano, C, Alavandi, S., Paulpandi, S, Ravichandran, P, and Rye, M., (2010) Limited evidence for genetic variation for resistance to White Spot Syndrome virus (WSSV) in Indian populations of Penaeus monodon Aquaculture Research, 41:872-877.
  11. Gopal, C., Gopikrishna, G., Krishna, G., Jahageerdar, S, Rye, M., Hayes, B.J., Paulpandi, S., Kiran, R.B., Pillai, S.M., Ravichandran, P., Ponniah, A.G. and Kumar, D. (2010) Weight and time of onset of female-superior sexual dimorphism in pond reared Penaeus monodon Aquaculture 318:74-78 .
  12. Shekhar, M.S., Kumar,M.D. and Gopikrishna, G. (2010), Development of immunodot blot assay for detection of white spot syndrome virus infection in shrimps (Penaeus monodon) Aquaculture Research 41: (11) 1683–1690.
  13. Krishna, G., Gopikrishna, G., Gopal, C., Jahageerdar, S., Ravichandran, P., Kannappan, S., Pillai, S.M., Paulpandi, S., Kiran,R.P., Saraswati, R., Venugopal, G., Kumar ,D., Gitterle,T., Lozano, C., Rye, M. and Hayes, B. (2011) Genetic parameters for growth and survival in Penaeus monodon cultured in India, Aquaculture 318:74-78.
  14. Gopikrishna, G., Gopal, C., Krishna, G., Jahageerdar, S., Rye, M., Lozano, C., Gitterle, T., Venugopal, G., Paulpandi, S., Ravichandran, P., Pillai, S.M., Ponniah, A.G. and Hayes, B. 2011, Effect of stocking density, water exchange rate and tank substrate on growth and survival of post-larvae of Penaeus monodon (Fabricious, 1798) Indian J. Fish., 58(3) : 57-61.
  15. Shekhar, M. S, Natarajan, M and Katneni, V. K. ( 2011). PCR-RFLP and sequence analysis of 12S and 16S rRNA mitochondrial genes of Grey mullets from East coast of India. Indian Journal of Geo-Marine Sciences. 40 (4), 529-534.
  16. Jithendran, K.P., Shekhar, M.S., Kannappan, S and Azad, I.S. (2011). Nodavirus Infection in Freshwater Ornamental Fishes in India: Diagnostic Histopathology and Nested RT-PCR. Asian Fisheries Science 24: (1), 12-19.
  17. Gopikrishna, G., Gopal, C., Shekhar, M.S., Katneni, V. K., Kannappan, S. and Ponniah, A.G. (2012) Growth performance and White Spot Syndrome Virus resistance in families of kuruma shrimp (Marsupenaeus japonicus) Indian Journal of GeoMarine Sciences, 41(1): 920-924.
  18. Shekhar, M. S., Kumar, M.D., Katneni,V. K., Gopikrishna, G., Rajesh, S., Kiruthika, J. and Ponniah, A.G. (2012) Transcript analysis of white spot syndrome virus latency and phagocytosis activating protein genes in infected shrimp (Penaeus monodon)Indian Journal of Virology
  19. Pradeep, B., Rai, P., Mohan, S.A., Shekhar, M.S., Karunasagar, I. (2012). Biology, Host Range, Pathogenesis and Diagnosis of White spot syndrome virus. Indian Journal of Virology, 23 (2) 161-174.
  20. Sahoo, P.K., Shekhar, M.S., Das, A., Kumar, M.D., Pillai, B.R. and Hameed, A.S.S. (2012). Immunomodulatory effect of recombinant RNA- dependent RNA polymerase protein of Macrobrachium rosenbergii nodavirus in giant freshwater prawn M. rosenbergii Aquaculture Research Volume 43, Issue 8, 1096–1106.
  21. Kiruthika, J., Rajesh, S., Katneni, V.K., Gopikrishna, G., Khan, I.H., Madhubabu, P.E., Natarajan, M., Dayal, J.S. and Ponniah, A. G. (2013) Effect of Salinity Stress on the Biochemical and Nutritional Parameters of Tiger Shrimp Penaeus monodon, Fishery Technology 50:294-300.
  22. Shekhar, M.S., Kiruthika, J., Ponniah,A.G. (2013). Identification and expression analysis of differentially expressed genes from shrimp (Penaeus monodon) in response to low salinity stress. Fish & Shellfish Immunology 35 (6): 1957–1968.
  23. Kiruthika, J., Rajesh, S., Ponniah, A.G. and Shekhar, M.S. (2013).Molecular cloning and characterization of Acyl-CoA binding protein (ACBP) gene from shrimp Penaeus monodon exposed to salinity stress. Developmental & Comparative Immunology 40:78–82.
  24. Baranski, M., Gopikrishna, G., Robinson, N.A, Katneni, V.K, Shekhar, M.S, Karthik, J.S., Jothivel, S., Gopal, C., Ravichandran, P., Kent, M., Arnyasi, M., and Ponniah, A.G.(2014) The Development of a High Density Linkage Map for Black Tiger Shrimp (Penaeus monodon) Based on cSNPs. PLoS ONE 9(1): e85413.
  25. Vij, S., Purushothaman, K., Gopikrishna, G., Lau, D., Saju, J.M., Shamsudheen, K.V., Kumar, K.V., Basheer, V.S., Gopalakrishnan, A., Hossain, M.S., Sivasubbu, S., Scaria.V., Jena, J.K., Ponniah,A.G. and Orbán, L (2014) Barcoding of Asian seabass across its geographic range provides evidence for its bifurcation into two distinct species Front.Mar.Sci. 1:30.
  26. Robinson, N.A., Gopikrishna, G., Baranski, M., Katneni, V.K., Shekhar, M.S., Karthik, J.S., Jothivel, S., Gopal, C., Ravichandran, P., Gitterle, T. and Ponniah, A.G. (2014) QTL for white spot syndrome virus resistance and the sex determining locus in the Indian black tiger shrimp (Penaeus monodon). BMC Genomics 15:731.
  27. Shekhar, M.S. Gomathi, A., Gopikrishna, G. and Ponniah, A.G. (2015) Gene expression profiling in gill tissues of White spot syndrome virus infected black tiger shrimp Penaeus monodon by DNA microarray. Virus Disease
  28. Gomathi, A., Otta, S.K. and Shekhar, M.S. (2015). A quantitative study on the relative virus load of white spot syndrome virus in infected tissues of tiger shrimp Penaeus monodon Indian Journal of Geo-Marine Science , 44 (6) 800-807.
  29. Shekhar, M.S., Ponniah, A.G. (2015). Recent insights into host pathogen interaction in white spot syndrome virus infected penaeid shrimp. Journal of Fish Diseases. 38 (7), 599–612.
  30. Vij, S., Kuhl, H., Kuznetsova, I.S., Komissarov, A., Yurchenko, A.A.,Van Heusden, P., Singh, S., Thevasagayam, N.M., Prakki, S.R.S., Purushothaman, K., Saju, J.M., Jiang, J., Mbandi, S.K., Jonas, M., Tong, A.H.Y., Mwangi, S., Lau, D., Ngoh, S.Y., Liew, W.C., Shen, X., Hon, L.S., Drake, J.P., Boitano, M., Hall, R., Chin, C., Lachumanan,R., Korlach, J., Trifonov, V., Kabilov, M., Tupikin, A., Green, D., Moxon, S., Garvin, T., Sedlazeck,F.J., Vurture,G.W., Gopikrishna, G., Katneni, V.K., Noble, T.H., Scaria, V., Sivasubbu, S., Jerry, D.R., O’Brien, S.J., Schatz, M.C., Dalmay, T., Turner, S.W., Lok, S., Christoffels, A., Orban, L. (2016) Chromosomal-Level Assembly of the Asian Seabass Genome Using Long Sequence Reads and Multilayered Scaffolding. PLoS Genet 12(4): e1005954.
  31. Katneni,V.K., Shekhar, M.S., Otta, S.K., Karthic, K., Ashok Kumar, J., Gopikrishna, G., and Vijayan, K.K. (2018) First report of a complete genome sequence of White spot syndrome virus from India. Genome Announc 6:e00055-18.
  32. Shekhar, M.S. Gomathi, A., Dubey, N.K., Katneni, V.K., and Vijayan, K.K. (2017) Effect of immune gene silencing in WSSV infected tiger shrimp Penaeus monodon. Fish & Shellfish Immunology 70, 252-259.